Transcript: lnc-HAO2-3:1

Basic information

LNCipedia transcript ID: lnc-HAO2-3:1 
LNCipedia gene ID: lnc-HAO2-3
Location (hg19): chr1:119896204-119897341
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 569 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT005561; FPKM1_group_1353_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.5659 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HAO2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAO2-3:1
4.0 lnc-HAO2-3:1
4.1 lnc-HAO2-3:1
5.0 lnc-HAO2-3:1
5.1 lnc-HAO2-3:1
5.2 lnc-HAO2-3:1