Transcript: lnc-HBEGF-2:10

Basic information

LNCipedia transcript ID: lnc-HBEGF-2:10 
LNCipedia gene ID: lnc-HBEGF-2
Location (hg19): chr5:139750476-139780986
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 583 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249637.1|ENST00000507521.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 94.9989 coding 
CPAT coding probability 0.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HBEGF-2:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HBEGF-2:10
5.0 lnc-HBEGF-2:10
5.1 lnc-DND1-18:8
5.2 lnc-HBEGF-2:10