Transcript: lnc-HBEGF-2:12

Basic information

LNCipedia transcript ID: lnc-HBEGF-2:12 
LNCipedia gene ID: lnc-HBEGF-2
Location (hg19): chr5:139760284-139761197
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 914 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003lfn_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.8151 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HBEGF-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HBEGF-3:1
4.0 lnc-HBEGF-3:1
4.1 lnc-HBEGF-2:12
5.0 lnc-HBEGF-2:12
5.1 lnc-DND1-18:12
5.2 lnc-HBEGF-2:12