Transcript: lnc-HBEGF-2:5

Basic information

LNCipedia transcript ID: lnc-HBEGF-2:5 
LNCipedia gene ID: lnc-HBEGF-2
Location (hg19): chr5:139779986-139781019
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1034 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1144:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -182.1352 non-coding 
CPAT coding probability 5.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HBEGF-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HBEGF-2:5
4.1 lnc-HBEGF-2:5
5.0 lnc-HBEGF-2:5
5.1 lnc-DND1-18:5
5.2 lnc-HBEGF-2:5