Transcript: lnc-HBM-1:1

Basic information

LNCipedia transcript ID: lnc-HBM-1:1 
LNCipedia gene ID: lnc-HBM-1
Location (hg19): chr16:218678-219333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 372 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT051746
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 136.8655 coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HBM-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HBM-1:1
4.0 lnc-HBM-1:1
4.1 lnc-HBM-1:1
5.0 lnc-HBM-1:1
5.1 lnc-DNASE1L2-118:1
5.2 lnc-HBM-1:1