Transcript: lnc-HDAC4-7:1

Basic information

LNCipedia transcript ID: lnc-HDAC4-7:1 
LNCipedia gene ID: lnc-HDAC4-7
Location (hg19): chr2:239779964-239782090
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2127 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_2654_NR_026664
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.5972 non-coding 
CPAT coding probability 36.78% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HDAC4-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HDAC4-7:1
4.0 lnc-HDAC4-7:1
4.1 lnc-HDAC4-7:1
5.0 lnc-HDAC4-7:1
5.1 lnc-ASB18-43:1
5.2 lnc-HDAC4-7:1