Transcript: lnc-HDGFL1-2:12

Basic information

LNCipedia transcript ID: lnc-HDGFL1-2:12 
LNCipedia gene ID: lnc-HDGFL1-2
Location (hg19): chr6:23445918-23454767
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 312 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT108100
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.949 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDGFL1-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRSN1-1:2
4.0 lnc-NRSN1-1:2
4.1 lnc-HDGFL1-2:12
5.0 lnc-HDGFL1-2:12
5.1 lnc-GMNN-24:10
5.2 lnc-HDGFL1-2:12