Transcript: lnc-HDHD2-7:1

Basic information

LNCipedia transcript ID: lnc-HDHD2-7:1 
LNCipedia gene ID: lnc-HDHD2-7
Ensembl Gene ID: ENSG00000266957
Ensembl Transcript ID: ENST00000592747
Location (hg19): chr18:44603732-44617651
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 200 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000592747.1
Alternative gene names: ENSG00000266957.1; AC012254.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HDHD2-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMAD2-7:1
5.1 lnc-SMAD2-7:1
5.2 lnc-HDHD2-7:1