Transcript: lnc-HEATR6-1:17

Basic information

LNCipedia transcript ID: lnc-HEATR6-1:17 
LNCipedia gene ID: lnc-HEATR6-1
Location (hg19): chr17:58160961-58162762
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 466 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: NONHSAT055072; ENST00000589777.1
Alternative gene names: ENSG00000261040.2; CTD-2319I12.1; ENSG00000261040.6; WFDC21P


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.4233 non-coding 
CPAT coding probability 4.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HEATR6-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HEATR6-1:17
4.0 lnc-HEATR6-1:17
4.1 lnc-HEATR6-1:17
5.0 lnc-HEATR6-1:17
5.1 lnc-TUBD1-4:32
5.2 lnc-HEATR6-1:17