Transcript: lnc-HEATR6-1:25

Basic information

LNCipedia transcript ID: lnc-HEATR6-1:25 
LNCipedia gene ID: lnc-HEATR6-1
Location (hg19): chr17:58160933-58165676
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261040.2|ENST00000587298.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.4233 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HEATR6-1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HEATR6-1:25
5.0 lnc-HEATR6-1:25
5.1 lnc-TUBD1-4:24
5.2 lnc-HEATR6-1:25