Transcript: lnc-HEATR6-1:9

Basic information

LNCipedia transcript ID: lnc-HEATR6-1:9 
LNCipedia gene ID: lnc-HEATR6-1
Location (hg19): chr17:58160925-58165601
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 402 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00026127
Alternative gene names: XLOC_012538; linc-HEATR6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.4233 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HEATR6-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HEATR6-1:8
3.1 lnc-HEATR6-1:9
4.0 lnc-HEATR6-1:9
4.1 lnc-HEATR6-1:9
5.0 lnc-HEATR6-1:9
5.1 lnc-TUBD1-4:30
5.2 lnc-HEATR6-1:9