Transcript: lnc-HES1-2:2

Basic information

LNCipedia transcript ID: lnc-HES1-2:2 
LNCipedia gene ID: lnc-HES1-2
Location (hg19): chr3:193788002-193826755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 466 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007062; NONHSAT094056
Alternative gene names: XLOC_002975; linc-HES1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.4572 non-coding 
CPAT coding probability 9.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HES1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HES1-1:2
3.1 lnc-HES1-2:2
4.0 lnc-HES1-2:2
4.1 lnc-HES1-2:2
5.0 lnc-HES1-2:2
5.1 lnc-MUC20-37:2
5.2 lnc-HES1-2:2