Transcript: lnc-HFM1-4:10

Basic information

LNCipedia transcript ID: lnc-HFM1-4:10 
LNCipedia gene ID: lnc-HFM1-4
Location (hg19): chr1:92034815-92035066
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 252 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066419.1|FTMT20200004701.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HFM1-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HFM1-4:10
5.0 lnc-HFM1-4:10
5.1 lnc-TGFBR3-4:12
5.2 lnc-HFM1-4:10