Transcript: lnc-HFM1-4:11

Basic information

LNCipedia transcript ID: lnc-HFM1-4:11 
LNCipedia gene ID: lnc-HFM1-4
Location (hg19): chr1:92004237-92035066
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1678 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066419.1|MICT00000015077.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -101.2221 non-coding 
CPAT coding probability 15.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HFM1-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HFM1-4:11
5.0 lnc-HFM1-4:11
5.1 lnc-TGFBR3-4:9
5.2 lnc-HFM1-4:11