Transcript: lnc-HFM1-4:7

Basic information

LNCipedia transcript ID: lnc-HFM1-4:7 
LNCipedia gene ID: lnc-HFM1-4
Location (hg19): chr1:92033289-92035442
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 639 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000066419.1|HBMT00000068239.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -261.6125 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HFM1-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HFM1-4:7
5.0 lnc-HFM1-4:7
5.1 lnc-TGFBR3-4:7
5.2 lnc-HFM1-4:7