Transcript: lnc-HGSNAT-10:1

Basic information

LNCipedia transcript ID: lnc-HGSNAT-10:1 
LNCipedia gene ID: lnc-HGSNAT-10
Location (hg19): chr8:43394280-43394615
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 336 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT126362
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.2525 non-coding 
CPAT coding probability 17.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HGSNAT-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HGSNAT-10:1
4.0 lnc-HGSNAT-10:1
4.1 lnc-HGSNAT-10:1
5.0 lnc-HGSNAT-10:1
5.1 lnc-KCNU1-116:1
5.2 lnc-HGSNAT-10:1