Transcript: lnc-HIST1H2AI-1:4

Basic information

LNCipedia transcript ID: lnc-HIST1H2AI-1:4 
LNCipedia gene ID: lnc-HIST1H2AI-1
Location (hg19): chr6:27730105-27730863
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 603 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011761; NONHSAT147387
Alternative gene names: XLOC_005221; linc-HIST1H2AI-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.8742 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2AI-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HIST1H2AI-1:4
3.1 lnc-HIST1H2AI-1:4
4.0 lnc-HIST1H2AI-1:4
4.1 lnc-HIST1H2AI-1:4
5.0 lnc-HIST1H2AI-1:4
5.1 lnc-OR2I1P-68:10
5.2 lnc-HIST1H2AI-1:4