Transcript: lnc-HIST1H2BI-2:5

Basic information

LNCipedia transcript ID: lnc-HIST1H2BI-2:5 
LNCipedia gene ID: lnc-HIST1H2BI-2
Location (hg19): chr6:26285912-26301555
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083282.1|MICT00000299207.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.3845 non-coding 
CPAT coding probability 7.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2BI-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HIST1H2BI-2:5
5.0 lnc-HIST1H2BI-2:5
5.1 lnc-CARMIL1-28:4
5.2 lnc-HIST1H2BI-2:5