Transcript: lnc-HIST4H4-2:1

Basic information

LNCipedia transcript ID: lnc-HIST4H4-2:1 
LNCipedia gene ID: lnc-HIST4H4-2
Location (hg19): chr12:14927339-14930934
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2210 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501744
Alternative gene names: ENSG00000246705


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 712.3986 coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HIST4H4-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HIST4H4-1:1
3.1 lnc-HIST4H4-2:1
4.0 lnc-HIST4H4-2:1
4.1 lnc-HIST4H4-2:1
5.0 lnc-HIST4H4-2:1
5.1 lnc-WBP11-2:1
5.2 lnc-HIST4H4-2:1