Transcript: lnc-HMGB2-3:14

Basic information

LNCipedia transcript ID: lnc-HMGB2-3:14 
LNCipedia gene ID: lnc-HMGB2-3
Location (hg19): chr4:174064647-174089833
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2737 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245213.2|MICT00000274477.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.4367 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMGB2-3:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HMGB2-3:14
5.0 lnc-HMGB2-3:14
5.1 lnc-HPGD-34:16
5.2 lnc-HMGB2-3:14