Transcript: lnc-HNF1B-2:4

Basic information

LNCipedia transcript ID: lnc-HNF1B-2:4 
LNCipedia gene ID: lnc-HNF1B-2
Location (hg19): chr17:36202573-36233931
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2319 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT053295
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.4478 non-coding 
CPAT coding probability 8.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNF1B-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNF1B-2:3
4.0 lnc-TBC1D3-2:2
4.1 lnc-TBC1D3-2:2
5.0 lnc-TBC1D3-2:2
5.1 lnc-SRCIN1-35:1
5.2 lnc-HNF1B-2:4