Transcript: lnc-HNF1B-3:1

Basic information

LNCipedia transcript ID: lnc-HNF1B-3:1 
LNCipedia gene ID: lnc-HNF1B-3
Location (hg19): chr17:35650484-36212438
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2229 bp
Exons: 3
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000514896
Alternative gene names: ENSG00000250985


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.8531 non-coding 
CPAT coding probability 5.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNF1B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HNF1B-3:1
3.1 lnc-HNF1B-3:1
4.0 lnc-HNF1B-3:1
4.1 lnc-HNF1B-3:1
5.0 lnc-HNF1B-3:1
5.1 lnc-SRCIN1-44:1
5.2 lnc-HNF1B-3:1