Transcript: lnc-HNRNPA1P48-17:1

Basic information

LNCipedia transcript ID: lnc-HNRNPA1P48-17:1 
LNCipedia gene ID: lnc-HNRNPA1P48-17
Location (hg19): chr16:51712726-51713070
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 345 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr16_5662_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.1116 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA1P48-17:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-327F22.5.1-17:1
4.0 lnc-RP11-327F22.5.1-17:1
4.1 lnc-RP11-327F22.5.1-17:1
5.0 lnc-RP11-327F22.5.1-17:1
5.1 lnc-ADGRG1-118:1
5.2 lnc-HNRNPA1P48-17:1