Transcript: lnc-HNRNPA1P48-6:1

Basic information

LNCipedia transcript ID: lnc-HNRNPA1P48-6:1 
LNCipedia gene ID: lnc-HNRNPA1P48-6
Location (hg19): chr16:51558115-51559006
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 275 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024398; NONHSAT142478
Alternative gene names: XLOC_011721; linc-CHD9-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -272.2571 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA1P48-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-327F22.5.1-5:1
3.1 lnc-RP11-327F22.5.1-6:1
4.0 lnc-RP11-327F22.5.1-6:1
4.1 lnc-RP11-327F22.5.1-6:1
5.0 lnc-RP11-327F22.5.1-6:1
5.1 lnc-ADGRG1-119:1
5.2 lnc-HNRNPA1P48-6:1