Transcript: lnc-HNRNPA2B1-10:1

Basic information

LNCipedia transcript ID: lnc-HNRNPA2B1-10:1 
LNCipedia gene ID: lnc-HNRNPA2B1-10
Ensembl Gene ID: ENSG00000270933
Ensembl Transcript ID: ENST00000602992
Location (hg19): chr7:25988277-25989023
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 747 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT119608; ENST00000602992.1
Alternative gene names: ENSG00000270933.1; CTD-2227E11.1; AC010719.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.8041 non-coding 
CPAT coding probability 4.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA2B1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNRNPA2B1-10:1
4.0 lnc-HNRNPA2B1-10:1
4.1 lnc-HNRNPA2B1-10:1
5.0 lnc-HNRNPA2B1-10:1
5.1 lnc-SKAP2-18:4
5.2 lnc-HNRNPA2B1-10:1