Transcript: lnc-HNRNPA2B1-15:11

Basic information

LNCipedia transcript ID: lnc-HNRNPA2B1-15:11 
LNCipedia gene ID: lnc-HNRNPA2B1-15
Ensembl Gene ID: ENSG00000225792
Ensembl Transcript ID: ENST00000451368
Location (hg19): chr7:26411764-26415892
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 611 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451368.1; AC004540.4-001; OTTHUMT00000328002.2; NONHSAT147539
Alternative gene names: ENSG00000225792.1; AC004540.4; OTTHUMG00000152805.2; AC004540.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.2375 non-coding 
CPAT coding probability 3.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA2B1-15:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0087-2:2
4.0 lnc-KIAA0087-2:2
4.1 lnc-KIAA0087-2:2
5.0 lnc-KIAA0087-2:2
5.1 lnc-SKAP2-9:11
5.2 lnc-HNRNPA2B1-15:11