Transcript: lnc-HNRNPCL2-1:2

Basic information

LNCipedia transcript ID: lnc-HNRNPCL2-1:2 
LNCipedia gene ID: lnc-HNRNPCL2-1
Location (hg19): chr1:13171871-13173157
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 891 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000970
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.1397 non-coding 
CPAT coding probability 25.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPCL2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WI2-2994D6.2.1-1:1
4.0 lnc-WI2-2994D6.2.1-1:1
4.1 lnc-WI2-2994D6.2.1-1:1
5.0 lnc-WI2-2994D6.2.1-1:1
5.1 lnc-HNRNPCL2-1:1
5.2 lnc-HNRNPCL2-1:2