Transcript: lnc-HNRNPLL-2:1

Basic information

LNCipedia transcript ID: lnc-HNRNPLL-2:1 
LNCipedia gene ID: lnc-HNRNPLL-2
Ensembl Gene ID: ENSG00000232518
Ensembl Transcript ID: ENST00000446277
Location (hg19): chr2:38895830-38898563
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 552 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446277.1; AC074366.3-001; OTTHUMT00000331249.1; NONHSAT070195
Alternative gene names: ENSG00000232518.1; AC074366.3; OTTHUMG00000153449.1; ENSG00000232518.3; AC074366.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.7809 non-coding 
CPAT coding probability 4.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPLL-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNRPLL-2:1
4.0 lnc-HNRPLL-2:1
4.1 lnc-HNRPLL-2:1
5.0 lnc-HNRPLL-2:1
5.1 lnc-MAP4K3-20:1
5.2 lnc-HNRNPLL-2:1