Transcript: lnc-HOMER1-3:1

Basic information

LNCipedia transcript ID: lnc-HOMER1-3:1 
LNCipedia gene ID: lnc-HOMER1-3
Location (hg19): chr5:78657784-78659412
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT102356
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.8672 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HOMER1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HOMER1-3:1
4.0 lnc-HOMER1-3:1
4.1 lnc-HOMER1-3:1
5.0 lnc-HOMER1-3:1
5.1 lnc-ANKRD34B-31:1
5.2 lnc-HOMER1-3:1