Transcript: lnc-HOXC4-2:1

Basic information

LNCipedia transcript ID: lnc-HOXC4-2:1 
LNCipedia gene ID: lnc-HOXC4-2
Ensembl Gene ID: ENSG00000248265
Ensembl Transcript ID: ENST00000515617
RefSeq ID: NR_026655
Location (hg19): chr12:54452038-54516018
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3942 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000515617; ENST00000515617.1; RP11-834C11.3-001; OTTHUMT00000358961.1; NONHSAT028567; NR_026655; NR_026655.1
Alternative gene names: ENSG00000248265; RP11-834C11.3; ENSG00000248265.1; OTTHUMG00000160034.1; FLJ12825; AC023794.1

RNA sequence:
TTTTCTCTCCCATTGCCTTTATATTCGGCAGCGCCTCTGACCTCTCCCCCACCCCCATCTCTGACCCTCCCAAGCCAGCCCTTGCTCAGCCCTGGTCTCCAGATAGGATGCCACTGCTTTTGTAGGACTGGGGATTTCTTGCCCAGAGTAATGGGAGAGGCAAGGCGCATGAATGCCTGTAAGTGCATTGTATCCCTCTCTCTTCAATGGCTAAGTAAAAAGAAGACGGGTGAAATGTCGACACCAATCTTCCAGGGTTCCTTCTCTCCAAGCGCCAGGAGATCCCCACAGGCCAAAGATCCCATTGACACAACTGCAAGGTCCATGAGGGCAGAGGCAGTGTCTGTTGCTGGGTGAGTGACTGGATTGAGCTCAAAGCATGTCTGAAGACTGAAATGGGCCAGGCAAGGAGATGGAAACTGGAGGCCTGGATTCTGGCTCGGTCATACCTCCAAGAACGTAACTTTCCCTCGACCCTGGGGAGTCTTCACAGACCTTCCTTCTGCTGTGAGGCACTGGAGAATCACTTGAGACCAGACTCAGGAAACTCTTCCCTGATGGGAAGACATTCATTCATCCACTCCACATCTCTGAAGCCCCAAGAGAAGGATCTGAATCCCCTAGTCTGAAGAGTCAGCAAGTGTCCAACATAGCAATCTTGATAAAAAGGGAGAATTGATAAAGGAGGGAGCAGCCCCACCTCAGTAACAAGAGGGAGGAAAATTCCAGCTAGTACATGTACTTAACATGAAAGCAGACATGTGCCAAGACCCTGCTTTCATGGATATTAGGTGTTCCCAAATATAAGAAACACCCATTCTTGCCCACAGGCCTCACTGGATACTATCCAAGATGTCTAGAGAATAAGAGGAAAGAGAGAATCATAATATCCAAAAGGTGGAAACAACCCAAATGTTCACCAATAGGTGAACGGATAAACAAAGTGTGATATATCCATACAATGGAATATTAGTCAGCCCTGAAAAGGAATGAAGTACTGATAAATGCTACAACATGGATGAACTTTGAAAACACTATGCTCAATGAAAGAAGCTAGTCACAGAAGGTCTCTTATTATATGATGCCATTCATATGAAAGTCCAGAATAGGGAAATCTACAGAGACTGAAAGTACATTAGTGTTGTTAAGGGCAAGAAGGAATATGGGGGGATAGGGAGGTGATAGCTAAAGGTTACAAGATTTCTTTTTGAGGTGATGAAAATGTTCTAAAATTAACTATGGTGATGGTTCGACATACTTGTGAATATACTAAAACCATTGAATTGTACATTTCAAATGGTGAATTGTATGACACATGAATTATACCTCAAGAAAGTTGCTTTTTAAAAAGACAGCGTAAGGGGTGGGGGGCAGTTGAGATGAAGCAGGAAAACTGTGATCAGAAGCAAAGCTCAGGGGCTGTCTGGCCTGGCTGCCCCAAGTCAAAGCCTGCATTTCATACAGGCAATGTTAGGGTAGCCCCCAAGCCATGATTCGGAAAGATAAATTGACCCCAGATGGAATAGGGCTGGGTCCCTTCTCCCTTGACAGCTCCCTTTCTGTGTTTTTTCTGGCACAAGAAACTCTGTCATCTTGTATAAATAGGAGAAATTTATGGCAGTTTTCCCTCTTCTTCTCCCTGGTGGGCTACTAGGAAAGGTCTAGGGGGAGGAGGGAGCCTGAAATTCCAAAAATATAAATGTGGAAAGACTGGAGGGGGTCGAGGAGTCTCTTTGCCTGCCTTAGCTCTGGCCCCAGCTCTCCTTTCCCTTTGCATGTTTGACCATCTGGGTGATGAGGAGGGTAGAGAACTGGTGCAGCCCGTCCTCTCTGCAAGCCCAAAAGAGATGGGTCCCAAAGCAGATATCCGACAGGAGGGGCACAAGGGAAATCAAGGAAATAGGCTTGGCTGTCCCATGAAATAATTGGAGGAGACACAGACCACTGCCCTCCTTCCTGGATTTGGCTATTTTTGTACTTCCCTGTTTGTTGAGGCAGCCTGATACAGCGGGAAGAGAACTCGTCCTCGATTTAGAAAGATTGACAGAGAAACTAAGTGTGTGACCTTAAGCAAGTCATATCTTGTCTCCGGGCCTCACCTGTAAAAAGAGGGAGGGGACTGAATTTATCAGGGGTTTTCAAATGATTTTAACTCTGGGGTCCTTCCTTCAAATAAAACCGTATGCAGTGACCCAACATGAACATGAGTAGTAGGCTGCTGAGCTTCTTGAAGGTAGGAATGGGAGTCTCAGGGCCCTGTGGTGACTGGCGAGAGGCTTGTCCAAGCACAAGATGATCTCCATGGCTTTTCCAGCCCCGTCCTCAGGAGGGATTTGCCCCCATGGTGAAGAGGCTCAGTTCTGCACACCCAGTGGGCTTGAAATCCAGCTCCACCCCCTCCTGTGTGTCCCTCAGCACATAACTTACCTTCCTTGAACCTGTTTCCTCGTGTGTAAATTGGAATAATAGTAACACATATCTCAGAGGATTGTCACATAGATTACACTAAATAATGTGCATAGAGTCCTTCGCATACTTATCTGGCCCAATAAATATTATTATAGTTATTCCGTGATCTGATGTAATCATTTTTTTATTTTGAGACAGAATCTCATTTTGTAGCCCAGACTGGTGCACAGTGGCATGATGTCAGTTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGAGTGTGCCACCGTGTCCAGCTAATTTTTGTATTTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGACTGGTCTCGAACTCCTGGCCTCAAGTGATCTGCCTGCCTCAGCCCCACACAGTGCTGGGATTACAGGCGCAAGCCATTGCACCTGGCCCGATACAATCTTTTTAATTTGAAATATCTGGTGTGAGAAGGTGAATTAGAAAGGATGACAGCAAAACTGCTATAACACAAAGGCCCCAAAACACAGTAGCATATAGAAAACAGAAGTTTATTTCTCACTTAGTCTGGGAGGAAGCGGTTCCAGACAGCAGGCAGCTCTGTTCCTCCTAGTCAGTCAGGGACGTGTGTTCCTTTCATACCTTTGCTTTGTCTTCCCTTAGGGATGTCTTTTCAGTTGCCTGGTCAAACCTGTCTCAGGCACATCTGCCCAGCTCATGAAAGAGAGAACACAAAGGAGAATTTACCCAATGTCATCAGGCTTTGAGGACATGCTTGCCTCACATTCCCCTGTGTCTACACCTGGCAACAAGAGCAGCTGGGAAATGGAGTGTCCAGCTGGGTGTCTCTCTACCCTCGTGCAGCAAGGAAAGAAGAGATTTTAGTGGACAACGGGCAGTCTTAATCCAGGGCTCAAACCCACACCCGAGCTGTCCTCTTCCTCTTCTCTTCCCAAAGGAAGGGAAATAAAGTCTACAGCCCAGAAAACAATGTGACCACCCATCCCCTACCCCAATCAGGTCCCTGCCATTCATCCCAAGATCAGCAGTCTTGGGAAAGTGGCTTGGAAGCCTCCCTCCAGAAAGACCACCCTTTTGTCCATCTTCTTCACATGGGTGGATGTGAGAAAAGTTTCTCTCCCCACTGCCTGCCTGCCACTCCCTGTCTCAGTTTCAGCTCACGCTCTAGCCCTTTGTTCCCAGTCACCAAGAGTGACTACAAATGCGGGGGAACAGGAGGACCTGAAACTTCATGGAAATTGAGACTGGGACACAGAAGCCATGCTCAGAGGCAGCCTAGGTGAGGGTTCTGATGCCAGGAAATCCAGCTACTACTGTGTAGCCTAAAGCGGGGATTAAGCTCTCAGAACTTCAATGAACTCTTTTGGAAATAGGGGTAAGAAGCCCACTTGTCAGGGCTGTTGTGAACATCAAATGTGATCATGTATGTACCTAGTACATAGTATGCCTTCAATAAATGGTAAGGCAAACCC