Transcript: lnc-HPF1-3:2

Basic information

LNCipedia transcript ID: lnc-HPF1-3:2 
LNCipedia gene ID: lnc-HPF1-3
Location (hg19): chr4:170475194-170520294
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2971 bp
Exons: 14
Sources: NONCODE v4
Alternative transcript names: NONHSAT099157
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.2361 non-coding 
CPAT coding probability 99.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HPF1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf27-3:1
4.0 lnc-C4orf27-3:1
4.1 lnc-C4orf27-3:1
5.0 lnc-C4orf27-3:1
5.1 lnc-HPF1-3:1
5.2 lnc-HPF1-3:2