Transcript: lnc-HPGD-1:2

Basic information

LNCipedia transcript ID: lnc-HPGD-1:2 
LNCipedia gene ID: lnc-HPGD-1
Location (hg19): chr4:175460340-175461406
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1067 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT099323
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.3797 non-coding 
CPAT coding probability 6.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HPGD-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HPGD-1:2
4.0 lnc-HPGD-1:2
4.1 lnc-HPGD-1:2
5.0 lnc-HPGD-1:2
5.1 lnc-HPGD-1:2
5.2 lnc-HPGD-1:2