Transcript: lnc-HPGDS-1:2

Basic information

LNCipedia transcript ID: lnc-HPGDS-1:2 
LNCipedia gene ID: lnc-HPGDS-1
RefSeq ID: NR_125922
Location (hg19): chr4:95038971-95128707
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1014 bp
Exons: 9
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125922; NR_125922.1
Alternative gene names: LOC101929210


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.0827 non-coding 
CPAT coding probability 3.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HPGDS-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HPGDS-1:2
4.0 lnc-HPGDS-1:2
4.1 lnc-HPGDS-1:2
5.0 lnc-HPGDS-1:2
5.1 lnc-GPRIN3-17:2
5.2 lnc-HPGDS-1:2