Transcript: lnc-HRASLS-2:1

Basic information

LNCipedia transcript ID: lnc-HRASLS-2:1 
HGNC Gene Symbol: lnc-HRASLS-2    
HGNC Full Gene Name: FGF12 antisense RNA 3
Ensembl Gene ID: ENSG00000226709
Ensembl Transcript ID: ENST00000452848
Location (hg19): chr3:192234620-192239187
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 291 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000452848.1; FGF12-AS3-001; OTTHUMT00000343159.1; NONHSAT093997
Alternative gene names: ENSG00000226709.1; FGF12-AS3; OTTHUMG00000156142.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -331.6426 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRASLS-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HRASLS-2:1
4.0 lnc-HRASLS-2:1
4.1 lnc-HRASLS-2:1
5.0 lnc-HRASLS-2:1
5.1 lnc-MUC20-49:3
5.2 lnc-HRASLS-2:1