Transcript: lnc-HRASLS-5:3

Basic information

LNCipedia transcript ID: lnc-HRASLS-5:3 
LNCipedia gene ID: lnc-HRASLS-5
RefSeq ID: NR_026877
Location (hg19): chr3:192959568-192961761
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2194 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026877; NR_026877.1
Alternative gene names: MGC2889


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.8044 non-coding 
CPAT coding probability 7.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRASLS-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OPA1-5:2
4.0 lnc-HRASLS-5:3
4.1 lnc-HRASLS-5:3
5.0 lnc-HRASLS-5:3
5.1 lnc-MUC20-45:2
5.2 lnc-HRASLS-5:3