Transcript: lnc-HRH3-1:4

Basic information

LNCipedia transcript ID: lnc-HRH3-1:4 
LNCipedia gene ID: lnc-HRH3-1
Location (hg19): chr20:60812801-60813287
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 487 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000055397.1|HBMT00000903892.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -394.8879 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRH3-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HRH3-1:4
5.0 lnc-HRH3-1:4
5.1 lnc-SPATA2-154:2
5.2 lnc-HRH3-1:4