Transcript: lnc-HSD17B3-4:4

Basic information

LNCipedia transcript ID: lnc-HSD17B3-4:4 
LNCipedia gene ID: lnc-HSD17B3-4
Location (hg19): chr9:98867764-98878696
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3740 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109118.1|MICT00000363165.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.0715 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSD17B3-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSD17B3-4:4
5.0 lnc-HSD17B3-4:4
5.1 lnc-FANCC-21:4
5.2 lnc-HSD17B3-4:4