Transcript: lnc-HSFY1-2:6

Basic information

LNCipedia transcript ID: lnc-HSFY1-2:6 
LNCipedia gene ID: lnc-HSFY1-2
Location (hg19): chrY:21729244-21752309
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 856 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT147778; NR_045129
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 113.7967 coding 
CPAT coding probability 37.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HSFY1-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYorf15A.1-2:3
4.0 lnc-CYorf15A.1-2:3
4.1 lnc-CYorf15A.1-2:3
5.0 lnc-CYorf15A.1-2:3
5.1 lnc-PRY-60:3
5.2 lnc-HSFY1-2:6