Transcript: lnc-HSP90AA1-14:2

Basic information

LNCipedia transcript ID: lnc-HSP90AA1-14:2 
LNCipedia gene ID: lnc-HSP90AA1-14
Location (hg19): chr14:102695410-102712584
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 878 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT040089
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 476.1693 coding 
CPAT coding probability 40.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HSP90AA1-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MOK-1:2
4.0 lnc-HSP90AA1-14:2
4.1 lnc-HSP90AA1-14:2
5.0 lnc-HSP90AA1-14:2
5.1 lnc-HSP90AA1-14:2
5.2 lnc-HSP90AA1-14:2