Transcript: lnc-HSPA12A-1:11

Basic information

LNCipedia transcript ID: lnc-HSPA12A-1:11 
LNCipedia gene ID: lnc-HSPA12A-1
Location (hg19): chr10:118592512-118609231
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 676 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225302.1|ENST00000453491.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -121.5662 non-coding 
CPAT coding probability 3.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA12A-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA1598-1:15
5.0 lnc-KIAA1598-1:15
5.1 lnc-NSMCE4A-89:10
5.2 lnc-HSPA12A-1:11