Transcript: lnc-HSPA13-4:1

Basic information

LNCipedia transcript ID: lnc-HSPA13-4:1 
LNCipedia gene ID: lnc-HSPA13-4
Location (hg19): chr21:15893494-15918634
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 282 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT081164
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.9111 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA13-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AF165138.7.1-4:1
4.0 lnc-AF165138.7.1-4:1
4.1 lnc-AF165138.7.1-4:1
5.0 lnc-AF165138.7.1-4:1
5.1 lnc-N6AMT1-112:1
5.2 lnc-HSPA13-4:1