Transcript: lnc-HSPB1-4:3

Basic information

LNCipedia transcript ID: lnc-HSPB1-4:3 
LNCipedia gene ID: lnc-HSPB1-4
Location (hg19): chr7:75947566-75952742
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3906 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000092703.1|MICT00000326961.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.6053 non-coding 
CPAT coding probability 11.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPB1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSPB1-4:3
5.0 lnc-HSPB1-4:3
5.1 lnc-FKBP6-74:3
5.2 lnc-HSPB1-4:3