Transcript: lnc-HSPB6-1:1

Basic information

LNCipedia transcript ID: lnc-HSPB6-1:1 
LNCipedia gene ID: lnc-HSPB6-1
Location (hg19): chr19:36238146-36244316
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1692 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000501632
Alternative gene names: ENSG00000247203


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.2405 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPB6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HSPB6-1:1
3.1 lnc-HSPB6-1:1
4.0 lnc-HSPB6-1:1
4.1 lnc-HSPB6-1:1
5.0 lnc-HSPB6-1:1
5.1 lnc-SCGB2B2-53:1
5.2 lnc-HSPB6-1:1