Transcript: lnc-HTD2-1:1

Basic information

LNCipedia transcript ID: lnc-HTD2-1:1 
LNCipedia gene ID: lnc-HTD2-1
Location (hg19): chr3:58304250-58305236
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 794 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT090119
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4206 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HTD2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-80H18.3.1-1:7
4.0 lnc-RP11-80H18.3.1-1:7
4.1 lnc-RP11-80H18.3.1-1:7
5.0 lnc-RP11-80H18.3.1-1:7
5.1 lnc-PDE12-20:6
5.2 lnc-HTD2-1:1