Transcript: lnc-HYAL4-5:3

Basic information

LNCipedia transcript ID: lnc-HYAL4-5:3 
LNCipedia gene ID: lnc-HYAL4-5
Ensembl Gene ID: ENSG00000272686
Ensembl Transcript ID: ENST00000607957
Location (hg19): chr7:123389122-123391220
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2099 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607957.1
Alternative gene names: ENSG00000272686.1; RP11-390E23.6; AC006333.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.9324 non-coding 
CPAT coding probability 14.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HYAL4-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HYAL4-4:3
4.0 lnc-HYAL4-4:3
4.1 lnc-HYAL4-4:3
5.0 lnc-HYAL4-4:3
5.1 lnc-SPAM1-23:3
5.2 lnc-HYAL4-5:3