Transcript: lnc-IBTK-10:2

Basic information

LNCipedia transcript ID: lnc-IBTK-10:2 
LNCipedia gene ID: lnc-IBTK-10
Ensembl Gene ID: ENSG00000232031
Ensembl Transcript ID: ENST00000457116
Location (hg19): chr6:82434439-82446070
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 471 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457116.1; RP5-991C6.4-001; OTTHUMT00000041335.1; NONHSAT113744
Alternative gene names: ENSG00000232031.1; RP5-991C6.4; OTTHUMG00000015100.1; AL078599.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.6787 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IBTK-10:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IBTK-2:1
4.0 lnc-IBTK-10:2
4.1 lnc-IBTK-10:2
5.0 lnc-IBTK-10:2
5.1 lnc-CEP162-36:2
5.2 lnc-IBTK-10:2