Transcript: lnc-ICOSLG-1:4

Basic information

LNCipedia transcript ID: lnc-ICOSLG-1:4 
LNCipedia gene ID: lnc-ICOSLG-1
Location (hg19): chr21:45620138-45622854
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1999 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA905:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.5657 non-coding 
CPAT coding probability 12.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ICOSLG-1:4
4.1 lnc-ICOSLG-1:4
5.0 lnc-ICOSLG-1:4
5.1 lnc-POFUT2-28:5
5.2 lnc-ICOSLG-1:4