Transcript: lnc-ICOSLG-1:7

Basic information

LNCipedia transcript ID: lnc-ICOSLG-1:7 
LNCipedia gene ID: lnc-ICOSLG-1
Ensembl Gene ID: ENSG00000232124
Ensembl Transcript ID: ENST00000437557
Location (hg19): chr21:45620499-45622747
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1641 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437557.2
Alternative gene names: ENSG00000232124.2; AP001057.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.5657 non-coding 
CPAT coding probability 8.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-POFUT2-28:6
5.1 lnc-POFUT2-28:6
5.2 lnc-ICOSLG-1:7