Transcript: lnc-ICOSLG-6:21

Basic information

LNCipedia transcript ID: lnc-ICOSLG-6:21 
LNCipedia gene ID: lnc-ICOSLG-6
Ensembl Gene ID: ENSG00000285413
Ensembl Transcript ID: ENST00000645813
Location (hg19): chr21:45592052-45614221
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3551 bp
Exons: 6
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645813.1
Alternative gene names: ENSG00000285413.1; AP001056.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.3433 non-coding 
CPAT coding probability 7.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-6:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-POFUT2-29:1
5.1 lnc-POFUT2-29:1
5.2 lnc-ICOSLG-6:21