Transcript: lnc-ID3-4:1

Basic information

LNCipedia transcript ID: lnc-ID3-4:1 
LNCipedia gene ID: lnc-ID3-4
Location (hg19): chr1:23940283-23945957
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1729 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000499591; TCONS_00000483; NONHSAT001536
Alternative gene names: ENSG00000247296; XLOC_000738; linc-ID3-1; AL451000.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.1523 non-coding 
CPAT coding probability 3.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ID3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ID3-4:1
3.1 lnc-ID3-4:1
4.0 lnc-ID3-4:1
4.1 lnc-ID3-4:1
5.0 lnc-ID3-4:1
5.1 lnc-ID3-4:1
5.2 lnc-ID3-4:1